Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNKWIKGAVVFVGGFATITTFSLIYHQKPKAPLNNQPSLLNDDEVKYPLQDYTFTQNPQPTNTESSKDATIKALQEQLKAALKALNSKEMNYSKEETFTSPPMDPKTTPPKKDFSPKQLDLLASRITPFKQSPKNYEENLIFPVDNPNGIDSFTNLKEKDIATNENKLL-RT---ITADKM-IPAFLITPISSQIAGKVIAQVESDIFASMGKAVLIPKGSKVIGYYSNNNKMGEYRLDIVWSRIITPHGINIMLTNAKGADIKGYNGLVGELIERN-FQRYGVPL-LLSTLTNGLLIGITSALNNRGNKEEVTNFFGDYLLLQLMRQSGMGINQVVNQILRDKS-KIAPIVVIREGSRVFISPNTDIFFPIPRENEVIAEFLK |
| 3JQO Chain:A ((12-227)) | ------------------------------------------------------------------------------------------------------------------------------------------------ETSEGSSALAKNLTPARLKASRAGVMANPSLTVPKGKMIPCGTGTELDTTVPGQVSCRVSQDVYSADGLVRLIDKGSWVDGQITGGIKDGQARVFVLWERIRNDQDGTIVNIDSAGTNSLGSAGIPG-QVDAHMWERLRGAIMISLFSDTLT---------------------------------------ALASEALRSYMSIPPTLYDQQGDAVSIFVARDLDFSGVYTLADN----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3JQO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -82825 for 1192 contacts (-69.5/contact) +
2D Compatibility (PS) -19100 + (NN) 752 + (LL) 10700
1D Compatibility (HY) 1200 + (ID) 1750
Total energy: -91023.0 ( -76.36 by residue)
QMean score : 0.333
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