Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIEISEWLQKLDDALDKVVAKK--EPESFLKPIISPIEDYQKSVRQIQAQFTDAPKFNEEGAYPQFLSCGLLQVRGKNGAN-MEFLLPKVYPFPPKSLYIEHEKDGQFLREMLMRLLSSAPLVQLEVILIDALSLGGIFNLARRLLDKNNDFI----YQQRILTESKEIEEALKHLHEYLKVNLQEKLAG--FRDFVHYNENA---KDSLPLKALFLSGVDAL----------------SKDALYYLEKIMRFGSKNGVLSFVNLESEKNNQSAEDLKRYAEFFKDRTSFECLKYLNVEII-SDQGIKSQHMQDFADKIKAYYKQKKEVKRELKDLQRDKEF---------WTKSSQHEVSVPVGWDINHKEVCFKIGNEQNHTLICDHSGS--GKSNFLHVLIQNL---AFYYDPDEVQLFLLDYKEGVE------FNAYVADPALEHAR----LV-----SVASSISYGITFLKWLCDEMQKRADRFKQF----NVKDLSDYRKHEKMPRLIVVID--EFQVLFSDNKSTKAVEG------HLNTLLKKGRSYGV--------------------HLVLATQTM-RGTDINPSFKAQIANRIALPMDAED----------SSSVLGDDAACEIQKPEGIFNNNGGNRKYHTKMSVPKAPDDFKS----FLTKIHAEFNQRNLAPIDRKIYNGETP------LKMPDTL---KANEMRLHLGKKVDYEQKDLI--VEFESNESHLLVVIQDLNARIALMKLLFQNVKSANKELVFCNKEKRLIRSFDAQKEYGITPV-ENILSVLDTAMNPN-----------SALVIDN--------LNEAKELHDKVGAEKLKSFLEKAIDNEQYCVIFAHDFRQIKTNYHFDKLKELLNNHFKQCLAFRCNGENLNAIKSDLPPPSKLNVLLIELSKDSVTEFRPFSL--------- |
| 2IPC Chain:A ((1-939)) | MLGLLRRLFDNNEREIARYYKQVVEPVNRLEAEVEKLPDLAAAYRELKEKHEKGA--SLDELLPMAFALTRESAKRYLGMRHFDVQLIGGAVLHEGKIAEMKTGEGKTLVATLAVALNALTGKGVHVVTVN-------DYLARRDAEWMGPVYRGLGLSVGVIQHASTPAERRKAYLADVTYVTNSELGFDYLRDNMAISPDQLVLRHDHPLHYAIIDEVDSILIDEARTPLIISGPAEKATDLYYKMAEIAKKLERGLPAEPGVRKEPTGDYTVEEKNRSVHLTLQGIAKAEKLLGIEGLFSPENMELAHMLIQAIRAKELYHRDRDYIVQDGQVIIVDEFTGRLMPGRRYGEGLHQAIEAKEGVRIERENQTLATITYQNFFRLYEKRAGMTGTAKTEEKEFQEIYGMDVVVVPTNRPVIRKDFPDVVYRTEKGKFYAVVEEIAEKYERGQPVLVGTISIEKSERLSQMLKEPRLYLPRLEMRLELFKKASQKQQGPEWERLRKLLERPAQLKDEDLAPFEGLIPPKGNLRTAWEGLKRAVHTLAVLRQGIPHQVLNAKHHAREAEIVAQAGRSKTVTIATNMAGRGTDIKLGGNPEYLAAALLEKEGFDRYEWKVELFIKKMVAGKEEEARALAQELGIREELLERIREIREECKQDEERVRALGGLFIIGTERHESRRIDNQLRGRAGRQGDPGGSRFYVSFDDDLMRLFASDRVIAMLDRMGFDDSEPIEHPMVTRSIERAQKRVEDRNFAIRKQLLQFDDVLSRQREVIYAQRRLILLGKDEEVKEAAIGMVEETVASLAENFLNPEVHPEDWDLEGLKATLLDTAPQLQDFPFAELRALKAEEAVERLVEAALKAYEAREAE-LSPPLMRAVERFVILNVVDNAWKEHLHNLDVLRQGIFLRGYGQKD--PFQEYKIEATRLFNEMVAFIKSEVAKFLFRLKVE |
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General information:
TITO was launched using:
| RESULT:
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Template: 2IPC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -19768 for 5726 contacts (-3.5/contact) +
2D Compatibility (PS) -83114 + (NN) -23172 + (LL) 752
1D Compatibility (HY) -11600 + (ID) 6400
Total energy: -143302.0 ( -25.03 by residue)
QMean score : 0.154
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