Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAFKVVQICGGLGNQMFQYAFAKSLQKHSNTPVLLDITSFDGSNRKMQLELFPIDLPYASAKEIAIAKMQHLPKLVRDALKY-M--GFDRVSQEIVFEYEPKLLKPSRLTYFYGYFQDPRYFDAISSLIKQTFTLPPPPENGNNKKKEEEYHRKLSLILAAKNSVFAHIRRGDYVGIGC-QLGIDYQKKAVEYMAKRVPNMELFVFCEDLKFTQNLDLGYPFMDMTTRDKDEEAYWDMLLMQSCKHGIIANSTYSWWAAYLINNPGKIIIGPKHWLFGHENILCKEWVKIESHFEVKSQKYNA |
| 4HR1 Chain:A ((3-120)) | ----------------------------------------------------------FNGAQTVIQKISWLRTAIAFLKGYMETTGATKKELEQVEKLKERVDEIATAVNWDVYAQYAR-----------------GDFNLLSDDEYKEIQKALLVLEDIKEQIIVEMLR---VGLAQGQMGTLKISDYLDSLDS----------------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4HR1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -19200 for 744 contacts (-25.8/contact) +
2D Compatibility (PS) -12624 + (NN) -8198 + (LL) 12596
1D Compatibility (HY) -1600 + (ID) 950
Total energy: -29976.0 ( -40.29 by residue)
QMean score : 0.366
|
|
|