Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----------------------------MPKPKKNTL-------PCSLSVKMSYFMRLLIKWRTRSLSHKMMTLVQILSILALASKASEDLE--------EQLKKIKDYIYK----------TLNAKIASDVYDR------------VLILVNEYCANEELFDK--------------ESVKISDLLIQD--IQLYALVDEMLKEDKYQVQHTILKGIIKRKYDEAYSLNSEDRILLEYQERLLEPSYASFSNKKFK- |
| 4MB0 Chain:A ((9-261)) | PRYWSLYYREKIIEGMEKGMTAKAGLIAHGRGEAFDYLIGERTIEPAERAMRAAVAKLLLAENPVVSVNGNVAALV-PKETIELARALNAKLEINLFYRTEDRVKAIAEELRKYDPEIELLGINPTKRIPGLEHERGKVDENGIWKADVVVVPLEDGDRTEALVRMGKFVITIDLNPLSRSARMADITIVDNIVRAYPRMTELAREMKDYSRGELIR--IIEEYDNGKTLN---DVLLHIRDRLTKLAEGGIWRKKQLD |
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General information:
TITO was launched using:
| RESULT:
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Template: 4MB0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -49761 for 1106 contacts (-45.0/contact) +
2D Compatibility (PS) -18124 + (NN) -6648 + (LL) 152
1D Compatibility (HY) -2800 + (ID) 1900
Total energy: -79081.0 ( -71.50 by residue)
QMean score : 0.333
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