Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MQENVPLSYDYSISKLFLYAMIAFGIIGMLIGIVLAFELSFPSLNYI--AGEYGVFGRLRPLHTNAVIY----GFTLGGIWASWYYIGQ----RVLKITYHQHPFLKIVGLLHFWLWILLLVLGVISLFAGLTQSKEYAELMWPLDIIVVVAWVLWGVNMFGSMSVRRENTIYVSLWYYIATYVGIAVMYIFNNLSIPTYFVADMGSVWHSISMYSGSNDALIQWWWGHNAVAFVFTSGVIGTIYYFLPKESG-QPIFSYKLTLFSFWSLMFVYIWAGGHHLIYSTVPDWVQTLSSVFSVVLILPSWGTAINMLLTMRGQWHQLKESP---LIKFLVLASTFYMLSTLEGSIQAIKSVNALAHF-TDWIIGHVHDGVLGWVGFTLIASMYHMTPRLFKREIYSGRLVDFQFWIMTLGIVLYFS-SMWIAGITQGMMWRDVDQYGNLTYQFIDTVKALIPYYNIRGVGGLMYFIGFIIFAYNIFMTITAGKKLEREPNYATPMAR |
| 3AYF Chain:A ((17-777)) | TTNSFLKSILIFTILISSTVLLVGGYWIFKEMAPRPKEVRSESGEVLMTKETIIGGQAVFQKYGLMDYGTVLGHGSYMGPDYTAEALKVYTEGMQDYKAKADLTDDEKSIIREQVIKEMRKNRYNPVTDVLVLTDAQVYGLEKVRDYYRDVFTNGDGWGLKKGLIKESDMPKANRAWVADSDQIQQIADFFFWTAWLSSTLRIGDEITYTNNWPYYEDAGNTMSFSAVWWSGASVTILILFIGIILYVFYRYQLSMQEAYAEGKFPVIDLRRQPLTPSQVKAGKYFVVVSALFFVQTMFGALLAHYYTEPDSFFGINWIYDILPFNIAKGYHLQLAIFWIATAWLGMGIFIAPLVGGQEPKKQGLLVDLLFWALVVLVGGSMIGQWLGVNGYLGNEWFLLGHQGWEYIELGRIWQIILVVGMLLWLFIVFRGVKRGLKRE---------SDKGGLIHLLFYSAIAVPFFYIFAFFIQPDT----NFTMADFWRWWIIHLWVEGIFEVFAVVVIGFLLVQLRLVTKKSTVRALYFQFTILLGSGVIGIGHHYYYNGSPEVWIALGAVFSALEVIPLTLLILEAYEQYKMMRDGGANFPYKATFWFLISTAIWNLVGAGVFGFLINLPAVSYFEHGQFLTPAHGHAAMMGVYGMFAIAVLLYSLRNIVKPEAWNDKWLKFSCWMLNIGLAGMVVITLLPVGILQMKEAFIHGYWASRSPSFLQQDVVQNLLLV-RAVPDTIFLIGVVALLVFAIKALFHLRKPTHGEGEE----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3AYF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -392461 for 3873 contacts (-101.3/contact) +
2D Compatibility (PS) -46618 + (NN) 3201 + (LL) 2224
1D Compatibility (HY) -26400 + (ID) 3750
Total energy: -463804.0 ( -119.75 by residue)
QMean score : 0.303
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