Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKGLWLVISLVFVGFLWANESYVFNNSKGRLTEKSVAFIEGVSKELYLKTGVRFAIDMTDFEKNPIALANKKERQSYQEGFLKQLKPPFVVFFFYHDAQKIELVANPKDLLDTDKIFFEKIAPLLPTNAKEYTPQRISAMLINGYSVAVDALAEKYHVNITQNFSAPKGVTFVKVVIYILLLTLLGAFLGLYFFKKS- |
| 1NXI Chain:A ((1-132)) | ---------------MSHQDDYLSVEELIEIQKEETRDIIQALLEDGSDPDALYEIEHH-LFAEDFDKLEKAAVEAFKMGF---------------------------EVLEAEETEDEDGNKLLCFDATMQSA--LDAKLIDEQVEKLVNLAEKF------------DIIYDGWGTY---------YEGLEHHHHHH |
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General information:
TITO was launched using:
| RESULT:
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Template: 1NXI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -27299 for 852 contacts (-32.0/contact) +
2D Compatibility (PS) -13719 + (NN) 2577 + (LL) 5788
1D Compatibility (HY) -400 + (ID) 1100
Total energy: -34153.0 ( -40.09 by residue)
QMean score : 0.178
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