Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRFSIFFKVVALFMITLFSFGAFAYYFVSSQISHENYQNEMRHYQFVTTINEILNNYSDYRAIEDYLYKIGFRETTIENLEKVLAKRRHQLHHRNIWYAEVFKFSDMVFILLKKDEHFVLYKDLHSVSYRNYFLAITVGLLLILFLFLFVLQSLLPLRELRSQVKRFAQGDKSVSCKSKQKDEIGDLANEFDNCIQKINAMNESRVLFLRSIMHELRTPITKGKILSSMLKEELSCKRFSSIFDHLNMLIEQFARIEQLASKNYGSNKEKFLMSDLIDKIEKMLLIDEDKKSPIHVS-SSNYIIEADFELFAIALKNMIDNAIKYSDDKQVFLDFIG--N--NLVVSNKSKPLK-EDFEKYLQPYFKSSNPSQAHGFGLGMYIIKNALEAMGLNLSYHYSN-GRICFTIHDCVFNSFYDLEADNEELPPPRKFERGEGNEGNRKSQLWG |
| 1YSR Chain:A ((5-149)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------HVPVDITDLLDRAAHDAARIYPD-LDVSLVPSPTCIIVGLPAGLRLAVDNAIANAVKHGGATLVQLSAVSSRAGVEIAIDDNGSGVPEGERQVVFERFS------------LGLALVAQQAQLHGGTASLENSPLGGARLVLRLPGPS---------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1YSR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -107287 for 1036 contacts (-103.6/contact) +
2D Compatibility (PS) -14158 + (NN) -10213 + (LL) 24404
1D Compatibility (HY) -1600 + (ID) 1000
Total energy: -109854.0 ( -106.04 by residue)
QMean score : 0.459
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