Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMIIIPARLKSSRFENKMLEDIFGLPMVVRCAKNA-NL-VDECVVACDDESIMKACQKFHIKAVLTSKHHNSGTERCLEAAQILGLKNDERVLNLQGDEPFLEKKVILALLEATQNA-PFM-ATCAKVIDEEQAKSPNLVKVVLDSQNNALYFSRSLIPFLRDFD-A----KRQTPLLGHIGIYGFHNKEILEELCA-LKPCVLEDTEKLEQL-RALYYQKKILVKIVQ-SESMGIDTKEDLQNALKIFSPNLLKR
3TQD Chain:A ((11-256))RVIIPARFD---LPGKALVDIAGKPMIQHVYESAIKSGAEEVVIATDDKRIRQVAEDFGAVVCMTSSDHQSGTERIAEAAVALGFEDDEIIVCLQGDEPLIPPDAIRKLAEDLDEHD-KVASLCTPITEVDELFNPHSTKVVLNRRNYALYFSHAPIPWGRDTFSDKENLQLNGSHYRHVGIYAYRV-GFLEEYLSWDAC-P-AEKMEALEQLRILWHGGRIHMVVAKSKCPPGVDTEEDLERVRAYF-------


General information:
TITO was launched using:
RESULT:

Template: 3TQD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -156151 for 1826 contacts (-85.5/contact) +
2D Compatibility (PS) -25162 + (NN) -12628 + (LL) 468
1D Compatibility (HY) -9200 + (ID) 3850
Total energy: -206523.0 ( -113.10 by residue)
QMean score : 0.506

(partial model without unconserved sides chains):
PDB file : Tito_3TQD.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3TQD-query.scw
PDB file : Tito_Scwrl_3TQD.pdb: