Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKNAFKAFALLIVFFSNALLAQDLKIAAAANLTRALKALVKEFQKEHPKDAINISFNSSGKLYAQIAQ---NAPFDLFISADIARPKKL-YDEKITPFKE------------------EVYAKG-VLVLWSENL----KMDSLEILKDPKIK-RIAMANPKLAPYGKASMEVLDRLK------LTPSLKSKI-I-YGASISQAHQFIATKNAQIGFGALSLIDK---K-D-------KNLSYFIIDK--TLYNPIEQALIITKNGANNPLAKVFKDFLFSPKARAIFKEYGYIVD |
| 2PT1 Chain:A ((18-285)) | --------------------QQEINLYSSRHY-NTDNELYAKFTAE-TGIKVNLIEGKADELLERIKSEGANSPADVLLTVDLARLWRAEEDGIFQPVQSEILETNVPEYLRSPDGMWFGFTKRARVIMYNKGKVKPEELSTYEELADPKWKGRVIIRSSSNEYNQSLVASLVVADGEESTLAWAKGFVSNFAREPQGNDTAQIEAVSSGEADLTLANTYYMGRLLESEDPAQKAIAENVGVFFPNQEGRGTHVNVSGVGVVKTAPNREGAVKFIEFLVSEPAQAFLAQNNYEYP |
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General information:
TITO was launched using:
| RESULT:
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Template: 2PT1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -101868 for 1634 contacts (-62.3/contact) +
2D Compatibility (PS) -22986 + (NN) -1814 + (LL) 2448
1D Compatibility (HY) -9600 + (ID) 1850
Total energy: -135670.0 ( -83.03 by residue)
QMean score : 0.477
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