Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFEKWIGLTLLLSSLGYPCQKVSISFKQYENLIHIHQKGCNNEVVCRTLISIALLESSLGLNNKR-EKSLKDTSYSMFHITLN-TAKKFY---PTYSKTLLKTKLLN-DVGFAIQLAKQILKENFDYYHQKHPNKSVYQLVEMAIGAYNGGMKHNPNGAYMKKFRCIYSQVRYNE
1IIZ Chain:A ((19-97))
------------------------------------------ENLMRDWVCLVENESARYTDKIANVNKNGSRDYGLFQINDKYWCSKGSTPGKDC--NVTCSQLLTDDITVASTCAKKIYKRTKFDAWSGWDNHCNHSNPDISSC-----------------------------
General information:
TITO was launched using:
RESULT:
Template:
1IIZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -21016 for 480 contacts (-43.8/contact) +
2D Compatibility (PS) -7254 + (NN) 2541 + (LL) 4508
1D Compatibility (HY) -2800 + (ID) 800
Total energy: -24821.0 ( -51.71 by residue)
QMean score : 0.373
(partial model without unconserved sides chains):
PDB file :
Tito_1IIZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1IIZ-query.scw
PDB file :
Tito_Scwrl_1IIZ.pdb
: