Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------MKATQSTINDFFALTGTIFSIPVYQRN-YTWEEENCEKLLQDIVNISQNKKTHFMGSITYILHLIDDEKSLRQLQEFVIIDGQQRITTIMLLLKAIETKIQNEGIKKEIDGLLNLSGQRLRLKPIKSDKEAFDLVMQNRSHEIQGVSHIKNNYKFFTKELDNYISKGYRIEEIY----GAFLWLKIVAIGLELGEDDPQVVFESIN-ATGVQLKGLDLIRNYLMMGENSDNQNRLYNTYWVPLENWLGEKDLNDFIKTYLRIYFEDRVKEGEREVYYALKAHHRDNFPNNIQGLMSDMREYGRIFQIFLDRDHYFLHRGDPQQLANLRLRVKDLVKIKFGVAKPFVLRCARDFEEGKLDYENFHEILQILISYFVRRSVCGDSTPTLTRVLYSL------YRQLGEDVSADALKRYLGKSVGQMAFPNDDKIKAAFLVRNAYAANQVCKFILLEIEKLSNAEPPKEENLEVEHFYPKTPTQEWRDRVGDYF--------TFEQDYLNNFGNLTLSGQNQRLGNKSYEAKIALMEEYSSLHLNDYFTNN-TDSWGIEEVRARSEYLADQFCQVGLFKDLPKEYRARELHKTLDDNLTNHNLQSVKLPNDQRRMAGNAKELASVVIDYLLENAREAFESYTDDESQKYIYWSKAKAEARDRDGTLVVPFEKYGFYFVSNASYQTTGSNLKDLILGCNLNPRDFVVE |
| 4BJU Chain:A ((1-548)) | MASPAVRKAISDAALQYAKPEGKIFQ---YGTAGFRMKADL-------------------LNTVVYAVGLLATLRSKK-------LSGQ----WIGVMVTASHNPAEDNGVK-----LVDPMGEMLE-----AEWEAYATKLANAP-----LENIGDVYDELVKEIDVSMENPARVVFARDTRASGSRLIGVLSAALTATE----AEFIDMKFMTTPQLHYVVRCKNTL--GTQYEYGEPTEQGYYEKLAAAFKRVMRGVKVKGSLTVDCANGV--------GGPKLRELIKYLPEDTGL-----------DIKIVNDDVI----NPDSL-------------NFECGADYVKTKQRAPPSSKASILD------------RCASLDGDAD----RILYYFLDEGNVFRLLDGDRIATLAASFIGDLARSAGIAQKLKI---GVVQTAYANGSSTEYIEKVLKLPSVCTNTGVKHLHHAAM---------RFDVGVYFEANGHGTITFSENALKTIKNTEPQ-------SPAQQRSLECLQALTDL-INQAVGDAISDMLLVEAILAHKGWTPKEWLAT--YTDLPSRLVRVEVAE-------RSIFKAYDAERKLESPPGLQAKIDSLQSRY--NKGRSFARASGTEDAVRVYAEAASRSEADDLATRVANAVRDAG----------TVKEILQA--------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4BJU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -15102 for 4496 contacts (-3.4/contact) +
2D Compatibility (PS) -54793 + (NN) -11486 + (LL) 12220
1D Compatibility (HY) -16400 + (ID) 5000
Total energy: -90561.0 ( -20.14 by residue)
QMean score : 0.187
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