Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQYANAYQAYQHNRVSVESPAKLIEMLYEGILRFSSQAKRCIENEDIEKKIYYINRVTDIFTELLNILDYEK--GGKVAVYLTGLYTHQIKVLTQANVENDASKIDLVLNVARGLLEAWREIHSDELA
3EAB Chain:A ((111-189))
------------------MEAERVRVFHKQAFEYISIALRIDEDEKAGQKEQAVEWYKKGIEELEKGIAVIVTGQGEQCERARRLQAKMMTNLVMAK-------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3EAB.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -37560 for 507 contacts (-74.1/contact) +
2D Compatibility (PS) -8155 + (NN) -1986 + (LL) 4424
1D Compatibility (HY) 800 + (ID) 650
Total energy: -43127.0 ( -85.06 by residue)
QMean score : 0.420
(partial model without unconserved sides chains):
PDB file :
Tito_3EAB.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3EAB-query.scw
PDB file :
Tito_Scwrl_3EAB.pdb
: