Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MILRRVTEALEAYKNGEMLIVMDDEDRENEGDLVLAGIFSTPEKINFMATHARGLICVSLTKDLANKFELPPMVSVNDSNHETAFTVSIDAKEAK--TGISAFERHLTIELLCKDTTKPSDFVRPGHIFPLIAKDGGVLARTGHTEASVDLCKLAGLKPVSVICEIMKE----DGSMAR------RGDKFLSDFAIKHNLKTLYVSDLISYRLENESLLKMFCQEEREFLKHQTQCYTFLDHQQKNHYAFKFKGAKTHDLAPLVRFHPIKEDFDFLTTGAFEAFFKALEYLKREGGYLIFMNTHSEQNNIVKDFGIGALVLKNLGVKDFRLLSSCEDRQYKALSGFGLKLVETISL |
| 1K49 Chain:A ((15-225)) | -----IPDVIQAFKNGEFVVVLDDPSRENEADLIIAAESVTTEQMAFMVRHSSGLICAPLTPERTTALDLPQMV-------GTAYTVSVDAEHPSTTTGISAHDRALACRMLAAPDAQPSHFRRPGHVFPLRAVAGGVRARRGHTEAGVELCRLAGKRPVAVISEIVDDGQEVEGRAVRAAPGMLRGDECVA-FARRWGLKVCTIEDMIAHVEKTEG------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1K49.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -136635 for 1562 contacts (-87.5/contact) +
2D Compatibility (PS) -21052 + (NN) -9643 + (LL) 11160
1D Compatibility (HY) -14400 + (ID) 4500
Total energy: -175070.0 ( -112.08 by residue)
QMean score : 0.551
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