Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKIKIQKIHPNALIPKYQTEGSSGFDLHAVEEVVIKPHSVGLVRIGICLSLEVGYELQVRTRSGLALNHQVMVLNSPGTVDNDYRGEIKVILANLSDKDFKVQVGDRIAQGVVQKTYKAEFIECEQLDETSRGSGGFGSTGVSKA
1Q5H Chain:B ((7-142))
MQLRFARLSEHATAPTRGSARAAGYDLYSAYDYTIPPMEKAVVKTDIQIALPSGCYGRVAPRSGLAAKHFIDV--GAGVIDEDYRGNVGVVLFNFGKEKFEVKKGDRIAQLICERIFYPEIEEVQALDDTERGSGGFG-------
General information:
TITO was launched using:
RESULT:
Template:
1Q5H.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -74633 for 865 contacts (-86.3/contact) +
2D Compatibility (PS) -14757 + (NN) -4280 + (LL) 320
1D Compatibility (HY) -8400 + (ID) 2450
Total energy: -104200.0 ( -120.46 by residue)
QMean score : 0.536
(partial model without unconserved sides chains):
PDB file :
Tito_1Q5H.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1Q5H-query.scw
PDB file :
Tito_Scwrl_1Q5H.pdb
: