Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLINAVIEKDENGYFAFVPFLKGCVSQGKSYEEALRNIKEAIELYLGDLEADELAFLSKKNSVIAPIEIAFA
1NTM Chain:I ((1-57))
MLSVA----ARSGPFA--PVLS---ATSRGVAGALRPLVQA-----AVPATSESPVLDLKRSVLCRESLRG-
General information:
TITO was launched using:
RESULT:
Template:
1NTM.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 12608 for 238 contacts (53.0/contact) +
2D Compatibility (PS) -5351 + (NN) 3321 + (LL) 1860
1D Compatibility (HY) -2800 + (ID) 850
Total energy: 8788.0 ( 36.92 by residue)
QMean score : 0.209
(partial model without unconserved sides chains):
PDB file :
Tito_1NTM.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1NTM-query.scw
PDB file :
Tito_Scwrl_1NTM.pdb
: