Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMDLEQAFLKIIEKKHKELNLGQDYNAIFSKIRDFEANAIGQIGEEFLKSVLNAIDEVINDGIIHDEYDIMTKSGVS-FEVKTAQKGRTNNTFQFNGINPRYNYDFLICLGVCEDQLLYRIFKKDEIHYIH----KERKYFMKQNEFKKQLVPMNPDNQVNDKLTLNLKELKEITNLIKELERILELD
2YVQ Chain:A ((5-1478))----SSGHTAFLKAMLSTGFKIPQKGILIGIQQSFRPRFLGVAEQLHNEGFKLFAT-------EATSDWLNANNVPATPVAWPSQELSS---------------------------IRKLIRDGSIDLVINLPNNNTKFVHDNYVIRRTAVDSGI---------------PLLTNFQVTKLFAEAVQ


General information:
TITO was launched using:
RESULT:

Template: 2YVQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -8713 for 924 contacts (-9.4/contact) +
2D Compatibility (PS) -13670 + (NN) -3237 + (LL) 3156
1D Compatibility (HY) -3600 + (ID) 600
Total energy: -26664.0 ( -28.86 by residue)
QMean score : 0.245

(partial model without unconserved sides chains):
PDB file : Tito_2YVQ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2YVQ-query.scw
PDB file : Tito_Scwrl_2YVQ.pdb: