Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDLEQAFLKIIEKKHKELNLGQDYNAIFSKIRDFEANAIGQIGEEFLKSVLNAIDEVINDGIIHDEYDIMTKSGVS-FEVKTAQKGRTNNTFQFNGINPRYNYDFLICLGVCEDQLLYRIFKKDEIHYIH----KERKYFMKQNEFKKQLVPMNPDNQVNDKLTLNLKELKEITNLIKELERILELD |
2YVQ Chain:A ((5-1478)) | ----SSGHTAFLKAMLSTGFKIPQKGILIGIQQSFRPRFLGVAEQLHNEGFKLFAT-------EATSDWLNANNVPATPVAWPSQELSS---------------------------IRKLIRDGSIDLVINLPNNNTKFVHDNYVIRRTAVDSGI---------------PLLTNFQVTKLFAEAVQ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2YVQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -8713 for 924 contacts (-9.4/contact) +
2D Compatibility (PS) -13670 + (NN) -3237 + (LL) 3156
1D Compatibility (HY) -3600 + (ID) 600
Total energy: -26664.0 ( -28.86 by residue)
QMean score : 0.245
|
|
|