Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLENVKKSLFRVLCLGALCLGGLMAEQDPKELVGLGAKSYKEQDFTQAKKYFEKACDLKEN--SGCFNLGVLYYQGHGVEK-NLKKAASFYSKACD--LNYSNGCHLLGNLYYSGQGVSQNTNKALQYYSKACD--LKYAEGCASLGGIYHDGKVVTRDFKKAVEYFTKACDLNDGD--GCTILGSLYDAGRGTPKDLKKALASYDKACDLKD-----------SPGCFNAGNMYHHGEGAAKNFKEALARYSKACELEN--GGGCFNLGAMQYNGEGATRNEKQAIENFKKGCKLGAKGACDILKQLKIKV |
| 3HYM Chain:B ((51-304)) | -----------------------KDPFHASCLPVHIGTLVELNKANELFYLSHKLVDLYPSNPVSWFAVGCYYLM----VGHKNEHARRYLSKATTLEKTYGPAWIAYGHSFAV----ESEHDQAMAAYFTAAQLMKGCHLPMLYIGLEYGL----TNNSKLAERFFSQALSIAPEDPFVMHEVGVVAFQN----GEWKTAEKWFLDALEKIKAIGNEVTVDKWEPLLNNLGHVCRK----LKKYAEALDYHRQALVLIPQNASTYSAIGYIHS----LMGNFENAVDYFHTALGLRRDDTFSVTMLGHCIE |
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General information:
TITO was launched using:
| RESULT:
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Template: 3HYM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -34922 for 1774 contacts (-19.7/contact) +
2D Compatibility (PS) -23702 + (NN) -7006 + (LL) 1480
1D Compatibility (HY) -9200 + (ID) 2100
Total energy: -75450.0 ( -42.53 by residue)
QMean score : 0.405
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