Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGKIGIFFGTDSGNAEAIAEKISKAIGNAEVID---VAKASKEQFNGFTKVILVAPTAGAGDLQTDWEDFLGTLEASDFANKTIGLVGLGDQDTYSETFAEGIFHIYEKAKA--GKVVGQTPTDGYHFEASKAVEGGKFVGLVIDEDNQDDLTDERIAKWVEQVKGSFA
1CZL Chain:A ((2-167))
--KIGLFYGTQTGVTQTIAESIQQEFGGESIVDLNDIANADASDLNAYDYLIIGCPTWNVGELQSDWEGIYDDLDSVNFQGKKVAYFGAGDQVGYSDNFQDAMGILEEKISSLGSQTVGYWPIEGYDFNESKAVRNNQFVGLAIDEDNQPDLTKNRIKTWVSQLKSEFG
General information:
TITO was launched using:
RESULT:
Template:
1CZL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -97253 for 1360 contacts (-71.5/contact) +
2D Compatibility (PS) -17594 + (NN) -9640 + (LL) 36
1D Compatibility (HY) -14400 + (ID) 3350
Total energy: -142201.0 ( -104.56 by residue)
QMean score : 0.567
(partial model without unconserved sides chains):
PDB file :
Tito_1CZL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1CZL-query.scw
PDB file :
Tito_Scwrl_1CZL.pdb
: