Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAKKKHKIPTLKYFLRSLKQIYRLITFKEKMIFFLLVLMAVFSSFVEVMSLTLLMPFITLASDPSRALDDKDWKMVYDFFHFSSPVRLMYFFSFCLVGIYLFRMFYGVFFTYLRGRFSNKKAYQIKQQLFLQHIKNNYLSHLN-HNLDSLR----DIINNKAEGMFMSFNAFLSLLTEITVIVFFYSTLI--LTNWKITLVF---TTILALQIFFIVKKVTVLIKKKGEMAAKSKAQTLKVFSKF-----FSNFK--ITKLKDNHEEAHKLFGENSRKAHDTE-----IIYST----------LQVVPRYSIE---TVGFSLLILAVAYILFKYGEARMVLPTISMYALALYRILPSVTGVISYYNEIAYNQLATNVVFKSLSKTIVEEDLVPLDFNEKITLQNISFAYKSKHPV--LKNFNLTIQKGQKIALIGHSGCGKSTLADIIMGLTYPKSGEIFIDNTLLTSENRRSWRKKIGYIPQNIYLFDGTVGDNIAFGS---AIDEKRLIKVCKMAHIYDFLCE--HEGLKTQVGEGGAKLSGGQKQRIGIARALYDNPEILVLDEATSALDNETESKIMDEIYQIAKNKTLIVIAHRLSTIERCEVIIDMSQHKDNLG |
4M2S Chain:B ((112-594)) | -----------------------------------------------------------------------------------------YYYTGIGAGVLIVAYIQVSFWCLAAGR----QIHKIRQKFF-HAIMNQEIGWFDVHDVGELNTRLTDDVSKINEGIGDKIGMFFQAMA-----TFFGGFIIGFTRGWKLTLVILAISPVLGLSAGIWAKILSSFTDKELHAYAKAGAVAEEVLAAIRTVIAFGGQKKELERYNNNLEEAKRLGIKKAITANISMGAAFLLIYASYALAFWYGTSLVISKEYSIGQVLTVFFSVLIGA-----FSVGQAS---PNIEAFANA--------RGAAYEVFKIIDNKPSIDSFSKSGHK--------PDNIQGNLEFKNIHFSYPSRKEVQILKGLNLKVKSGQTVALVGNSGCGKSTTVQLMQRLYDPLDGMVSIDGQDIRTINVRYLREIIGVVSQEPVLFATTIAENIRYGREDVTMDE--IEKAVKEANAYDFIMKLPHQ-FDTLVGERGAQLSGGQKQRIAIARALVRNPKILLLDEATSALDTESEAVVQAALDKAREGRTTIVIAHRLSTVRNADVIAGFDGGVIVEQ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4M2S.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -191112 for 3038 contacts (-62.9/contact) +
2D Compatibility (PS) -46420 + (NN) -13743 + (LL) 12860
1D Compatibility (HY) -30400 + (ID) 8100
Total energy: -276915.0 ( -91.15 by residue)
QMean score : 0.296
|
|
|