Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDSTLKHLAIIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTENWKRPKSEVDFLMKMLKKYLKDERSTYLDNNIRFRAIGDLEGFSKELRDTILRLENDTRYFKDFTQVLALNYGSKNELSRAFKSLLEN------PPNHINNIESLENEISHRLDTHDLPEVDLLLRTGGEMRLSNFLLWQSSYAELFFTPILWPDFTPKDLENIISDFYKRVRKFGELKC
1UEH Chain:B ((19-241))
-----RHVAIIMDGNGRWAKKQGKIRAFGHKAGAKSVRRAVSFAANNGIEALTLYAFSSENWNRPAQEVSALMELFVWALDSEVKSLHRHNVRLRIIGDTSRFNSRLQERIRKSEALTAGNTGLTLNIAANYGGRWDIVQGVRQLAEKVQQGNLQPDQID-----EEMLNQHVCMHELAPVDLVIRTGGEHRISNFLLWQIAYAELYFTDVLWPDFDEQDFEGALNAFANRER-------
General information:
TITO was launched using:
RESULT:
Template:
1UEH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -97790 for 1593 contacts (-61.4/contact) +
2D Compatibility (PS) -23071 + (NN) -9779 + (LL) 1132
1D Compatibility (HY) -14400 + (ID) 4850
Total energy: -148758.0 ( -93.38 by residue)
QMean score : 0.514
(partial model without unconserved sides chains):
PDB file :
Tito_1UEH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1UEH-query.scw
PDB file :
Tito_Scwrl_1UEH.pdb
: