Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMIVKRLNPDALKSALQKIGPEKIAQTHMRQKGVSFVFEIQHLPLSAALILKQEAISVGGDFATPRDCILAKEPFYDGVLIASAKQLERLIVKCHSQPFGLKHLAQELKSHLKAKKPNAPQIMAILNLTPDSFYEKSRFDS-KKALEEIYQWLEKGITLIDIGAASSRPQSEIIDPKVEQDRLKEILLEIKSQKLYQRAQFSIDTYHATTAQMALEHYFSILNDVSGFNS-IEMLEVARDYQPTCILMHAQKTPKDMQENVFYHNLFDEMDRFFKEKLEVLEKYTLQD--IILDIGFGFAKLKEHNLALIKHLSHFLKFKKPLLVGASRKNTIGLITGREVQDRLAGTLSLHLMALQNGASILRAHDIDEHIDLIKVFKSLEETD
3TYD Chain:B ((42-291))------------------------------------------------------------------------------------------------------------------------IMGILNVTPD----GGSYNEVDAAVRHAKEMRDEGAHIIDIGGEST---------SVEEE-IKRVVPMIQAVSKEVKLPISIDTYKAEVAKQAIEAGAHIINDIWGAKAEPKIAEVAAHYDVPIILMHNR-------DNMNYRNLMADMIADLYDSIKIAKDAGVRDENIILDPGIGFAKTPEQNLEAMRNLEQLNVLGYPVLLGTSRKSFIGHVLDLPVEERLEGTGATVCLGIEKGCEFVRVHDVKEMSRMAKMMDAMIGK-


General information:
TITO was launched using:
RESULT:

Template: 3TYD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		3D Compatibility (PKB) -173751 for 1990 contacts (-87.3/contact) +
2D Compatibility (PS) -25642 + (NN) -15552 + (LL) 10436
1D Compatibility (HY) -16000 + (ID) 3900
Total energy: -224409.0 ( -112.77 by residue)
QMean score : 0.517

(partial model without unconserved sides chains):
PDB file : Tito_3TYD.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3TYD-query.scw
PDB file : Tito_Scwrl_3TYD.pdb: