Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGSIGSMGKPIEGFLVAAIQFPVPIVNSRKDIDHNIESIIRTLHATKAGYPGVELIIFPE------YSTQGLNTAKWLSEEFLLDVPGKETELYAKACKEAKVYGVLSIMERNPDS-NENPYNTAIIIDPQGKIILKYRKLFPWNP-------------IEPWYPGDLGMPVCEGPGGSKLAVCICHDGMIPELAREAAYKGCNVYIRI----------SGYSTQVNDQWILTNRSNAWHNLMYTVSVNLAGYDNVFYYFGEGQICNFDGTTLVQGHRNPWEIVTGEIYPKMADNARLSWGLENNIYNLGHRGYVAKPGGEHDAGLTYIKDLAAGKYKLPWEDHMKIKDGSIYGYPTTGGRFGK |
| 1FO6 Chain:A ((3-304)) | -----------RQMILAVGQQGP--IARAETREQVVGRLLDMLTNAAS--RGVNFIVFPELALTTFFPRWHFTDEAELDSFYETEMPGPVVRPLFETAAELGIGFNLGYAELVVEGGVKRRFNTSILVDKSGKIVGKYRKIHLPGHKEYEAYRPFQHLEKRYFEPGDLGFPVYDVDA-AKMGMFICNDRRWPETWRVMGLKGAEIICGGYNTPTHNPPVPQHDHLTSFHHLLSMQAGSYQNGAWSAAAGKVGMEEGCMLLGHSCIVAPTGEIVALTTTLEDEVITAALDLDRCRELREHIF-------------------------NFKAHRQPQHYGLIAEF--------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1FO6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -163880 for 2231 contacts (-73.5/contact) +
2D Compatibility (PS) -30232 + (NN) -20211 + (LL) 796
1D Compatibility (HY) -10000 + (ID) 2700
Total energy: -226227.0 ( -101.40 by residue)
QMean score : 0.465
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