Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQKKIFLLEDDYLLSESIKEFLEHLGYEVFCAFNGKEAHERLSVERFNLLLLDVQVPEMNSLELFKRIKNDFLISTPVIFITALQDNATLKNAFNLGASDYLKKPFDLDELEARIKRFFNDDPIEIMPNIFYHQHALNVKGKKEILAPKTAQLLEYFLEHKGQIISSQALENNLWEQAIDDSTLRTYIKVLRKLLGKNCIETHKGVGYRFNPL
3W9S Chain:A ((2-116))
---KILVIEDDALLLQGLILAMQSEGYVCDGVSTAHEAALSLASNHYSLIVLDLGLPDEDGLHFLSRMRREKM-TQPVLILTARDTLEDRISGLDTGADDYLVKPFALEELNARIRALLR---------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3W9S.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -99783 for 884 contacts (-112.9/contact) +
2D Compatibility (PS) -12608 + (NN) -7711 + (LL) 7068
1D Compatibility (HY) -9600 + (ID) 1800
Total energy: -124434.0 ( -140.76 by residue)
QMean score : 0.752
(partial model without unconserved sides chains):
PDB file :
Tito_3W9S.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3W9S-query.scw
PDB file :
Tito_Scwrl_3W9S.pdb
: