Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MMNRVVLVGRLTKDPELRYTPAGVAVATFTLAVNRTFTNQ-QGE--READFINCVVWRK-PAENVANFLKKGSMAGVDGRVQTRNYEGNDGKRVYVTEIVAE----SVQFLEPRNSNGGGGNNYQSGNNNNNYNSGGNNFGQAPTNNGGFGQDQQQSQNQNYQSTNNDPFASDGKPIDISDDDLPF
3ULP Chain:A ((81-194))
SLNKIMLIGRVGCEPDIKILNGGDKVATFSLATNEFWRDRNTNELKSKTDWHRIVVYDQNIVDLIDKYLRKGRRVYVQGSLHTRKWHT--SQPKQITEIILSYNKGDLIFLD--------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3ULP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -50868 for 617 contacts (-82.4/contact) +
2D Compatibility (PS) -11133 + (NN) -1374 + (LL) -2064
1D Compatibility (HY) -8800 + (ID) 1450
Total energy: -75689.0 ( -122.67 by residue)
QMean score : 0.643
(partial model without unconserved sides chains):
PDB file :
Tito_3ULP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3ULP-query.scw
PDB file :
Tito_Scwrl_3ULP.pdb
: