Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLPVFICEDNRMQRERLTKYIEDYIMVEHFDMKLELSTGDPFELVSRMPTHQGM-GLYFLDIDLGQPDMNGFELAQEIRKFDPRGFIIFITTHAEL--SYMTFTYKVEALDYIIKDDIDL-LHDRVLACMKQAEERISNDQDMQKYFTFKVSDKKIIHELLDDILFFETAPTIHKVILHGKNRQVEFYGKLKNIEKMLDESFYRCHRSYIVNKKNIHELDTTKGVVKMSNGENCYASSKLIKSLSL
1DBW Chain:A ((4-120))
-YTVHIVDDEEPVRKSLAFMLTMN----GFAVKMHQSAEAFLAFAP-----DVRNGVLVTDLRM--PDMSGVELLRNLGDLKINIPSIVITGHGDVPMAVEAMK--AGAVDFIEKPFEDTVIIEAIERASE-------------------------------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1DBW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -89781 for 864 contacts (-103.9/contact) +
2D Compatibility (PS) -12219 + (NN) -4194 + (LL) 9740
1D Compatibility (HY) -6400 + (ID) 1250
Total energy: -104104.0 ( -120.49 by residue)
QMean score : 0.367
(partial model without unconserved sides chains):
PDB file :
Tito_1DBW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1DBW-query.scw
PDB file :
Tito_Scwrl_1DBW.pdb
: