Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTKNFKKLKSLHELPTPLILYNCWDVASARAIQQGGAPVIATSSYAIAESLGAVDGEHLTFDEMFSVISRIAENVSLPLTVDIETGYARNLEELAQNVERLLAIGVCGVNLEDQLIGVTNPGLCSTEEQCDKIKTIKETAAKMSTEIFINARTDVFFQGRDEAVDLVEEAISRANAYKEAGADAIFIPGLLSPNLIRAFVEKSPLPVNVM--RM--DGMLSNEDLQKIGVKRISYGPFS--FFQANLAIQQEVERIFEGGKAL
2QIW Chain:A ((6-247))
-KSLATKFASDHESGKLLVLPTVWDTWSAGLVEEAGFSGLTIGSHPVADATGSSDGENMNFADYMAVVKKITSAVSIPVSVDVESGYGL---SPADLIAQILEAGAVGINVEDVVHSE-GKRVREAQEHADYIAAARQAADVAGVDVVINGRTDAVKLGADVFEDPMVEAIKRIKLMEQAGARSVYPVGLSTAEQVERLVDAVSVPVNITAHPVDGHGAGDLATLAGLGVRRVTFGPLWQKWLAATS----------------
General information:
TITO was launched using:
RESULT:
Template:
2QIW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -141829 for 2044 contacts (-69.4/contact) +
2D Compatibility (PS) -25736 + (NN) -11800 + (LL) 2028
1D Compatibility (HY) -10800 + (ID) 3400
Total energy: -191537.0 ( -93.71 by residue)
QMean score : 0.530
(partial model without unconserved sides chains):
PDB file :
Tito_2QIW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2QIW-query.scw
PDB file :
Tito_Scwrl_2QIW.pdb
: