Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTASVFVAGKLLPETMEALSKWDVKAFSGEENITEAELINNVTEVDAIICPLSSPISAKVLESAKNLKIVANIGAGFDNIDVKKAQELGIAVTNTPDVSTEATAELTLGLILDVARR-------ISEGDRLCRETPEQFKGWAPTFFLGTELSGKTLGIIGLGRIGQAVAKRAAAFGMNII-YSGHQPKEAAKEWNAEFVSQ-KELLKRSDVVTIHAAYSPSLKHLLNETTLKTMKSSAFLINAARGPVVEEAALIKALETGVIAGAALDVFEFEPKIGEDFAKLD--NVVLTPHIGNATVETRAAMGKIAIANVEAVLAGKAPLHSVY |
| 4U6Q Chain:A ((80-338)) | ------------------------------------------------------------LEKFKALRIIVRIGSGFDNIDIKSAGDLGIAVCNVPAASVEETADSTLCHILNLYRRATWLHQALREGTRV--QSVEQIREVASG---AARIRGETLGIIGLGRVGQAVALRAKAFGFNVLFYDPYLSDGVERALGLQRVSTLQDLLFHSDCVTLHCGLNEHNHHLINDFTVKQMRQGAFLVNTARGGLVDEKALAQALKEGRIRGAALDVHESEPFSFSQGPLKDAPNLICTPHAAWYSEQASIEMREEAAREIRRAITGRIP----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4U6Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -120104 for 1865 contacts (-64.4/contact) +
2D Compatibility (PS) -27562 + (NN) -16146 + (LL) 5892
1D Compatibility (HY) -16800 + (ID) 5400
Total energy: -180120.0 ( -96.58 by residue)
QMean score : 0.531
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