Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------------VDSEMNHDFDL-------EKQFAFFVVNFRMSKHDFEELTEVEKN----FIMKEWENKVIFESTMLRNAVLNAEQNLNRKRNSRFIDL-------HKKRQKKADVNYTVNALQAISENEAKEGKAWIDRIYGANGLRRPKNKEERRNVNGGF--------------------- |
| 1DD5 Chain:A ((2-185)) | VNPFIKEAKEKMKRTLEKIEDELRKMRTGKPSPAILEEIKVDYYGVPTPVNQLATISISEERTLVIKPWDKSVLSL---IEKAINASDLGLNPINDGNVIRLVFPSPTTEQREKWVKKAKEIVEEGKIAIRNIRREILKKIKEDQKEGLIPEDDAKRLENEIQKLTDEFIEKLDEVFEIKKEEIMEF |
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General information:
TITO was launched using:
| RESULT:
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Template: 1DD5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -12671 for 793 contacts (-16.0/contact) +
2D Compatibility (PS) -13348 + (NN) 989 + (LL) 232
1D Compatibility (HY) -4000 + (ID) 750
Total energy: -29548.0 ( -37.26 by residue)
QMean score : 0.398
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