Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPKNLYNYQEFIRLSHEGKIAYEQIDVPKNASLLTEKIDIDNHIYLVVDGYIALILNDGSQNSKIYSIQGKGTFLNYFTLLDQSNNHFNFKTLSGCSLYKYSKADMEYFLSMFPENFGFQFFIMKNQTTHVYFKSLMASSPASEKLKTTFSNMALLHGVLSDDGTVILPQAIKTSHLLSYSNLSKSCFYKDLQYLKTTNQIEKKEKCWIIHDQALYTMIQNGQTSF |
| 3GYD Chain:A ((60-168)) | -------------------SYMQCYAAPRDCQLLTEGDPG-DYLLLILTGEVNVIKDIPNKGIQTIAKVGAGAIIGEMSMIDGMPRSASCVASLPTDFAVLSRDALYQLLANMPKLGNKVLIRLLQLLT------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GYD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -75314 for 754 contacts (-99.9/contact) +
2D Compatibility (PS) -11486 + (NN) -1783 + (LL) 8124
1D Compatibility (HY) -4000 + (ID) 750
Total energy: -85209.0 ( -113.01 by residue)
QMean score : 0.393
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