Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LDKKAIFDSVSNMEEQIGELYQQLGDLKTNLGEMLEENNRLNLENEHLRRRLSLTDEATPEPKAETEAEHGVMAPNRKEAMQQMIELGEGYDNLVQLYKEGFHVCNVHFGSPRGNDEDCLFCLSLLNKK
2OQQ Chain:A ((5-41))
----------------LSELENRVKDLENKNSELEERLSTLQNENQMLRHILK----------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2OQQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 2421 for 142 contacts (17.0/contact) +
2D Compatibility (PS) -4023 + (NN) -2772 + (LL) 5552
1D Compatibility (HY) -1600 + (ID) 600
Total energy: -1022.0 ( -7.20 by residue)
QMean score : 0.523
(partial model without unconserved sides chains):
PDB file :
Tito_2OQQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2OQQ-query.scw
PDB file :
Tito_Scwrl_2OQQ.pdb
: