Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-----MQVTDVRLRRVETDGRMRAIASITLDEEFVVHDIRVIDGNNGLFVAMPSKRGVDGEFRDIAH-----PINSDTRAKIQE-------VVLAEYERVGEEEATAVTEEESESVSAE
1TTW Chain:A ((3-120))
TYSSLLEEFATELGLEEIETNELGHGAVTIDKIWVVHLAPINEKELVAFMRAGILTG-QSQLYDILRKNLFSPLSGVIRCALDKDDHWLLWSQLNINDTSGTQLASVLTSLVDKAVTLS
General information:
TITO was launched using:
RESULT:
Template:
1TTW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 11147 for 618 contacts (18.0/contact) +
2D Compatibility (PS) -10650 + (NN) 1176 + (LL) 192
1D Compatibility (HY) -1600 + (ID) 900
Total energy: -635.0 ( -1.03 by residue)
QMean score : 0.123
(partial model without unconserved sides chains):
PDB file :
Tito_1TTW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1TTW-query.scw
PDB file :
Tito_Scwrl_1TTW.pdb
: