Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMIRIGQGYDVHKLAYDRDLIIGGVKIPYEKGLLGHSDADVLLHAITDAIIGAIGAGDIGHFFPDTDMVFKDADSAELLAEIWQKVEADGFRLGNLDATIIAEKPKMAPYVEQMKLRIAELLHADSAQVNVKATTTEKLGFTGREEGIASLAVVLLEK
2AMT Chain:F ((1-156))-MRIGHGFDVHAFGGEGPIIIGGVRIPYEKGLLAHSDGDVALHALTDALLGAAALGDIGKLFPDTDPAFKGADSRELLREAWRRIQAKGYTLGNVDVTIIAQAPKMLPHIPQMRVFIAEDLGCHMDDVNVKATTTEKLGFTGRGEGIACEAVALLIK


General information:
TITO was launched using:
RESULT:

Template: 2AMT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -105862 for 1319 contacts (-80.3/contact) +
2D Compatibility (PS) -17099 + (NN) -9558 + (LL) 208
1D Compatibility (HY) -14000 + (ID) 4850
Total energy: -151161.0 ( -114.60 by residue)
QMean score : 0.551

(partial model without unconserved sides chains):
PDB file : Tito_2AMT.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2AMT-query.scw
PDB file : Tito_Scwrl_2AMT.pdb: