Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTFPQVLTIAGSDSGGGAGIQADIKTFQERRTFGMSVITAI-TAQNTLGVKAVHKIPVEMIREQCDAIAEDFQVSAVKTGMLADAEIIREVVRNIRLHNFPNLVIDPVMIAKGGTALLENEATQVLKDELLPLGTIITPNIPEAEEILG-EKITTKAEIERAAKKIYDMGVKAVVIKGGHS-EMTEAADFYFDGVTAKWLTSERFDTPHTHGTGCTFSACIAAELAKGNSLLDSVMVAKEFISSAIKYPLGIGHGHGPTNHFAY-RMEDGK
4C5J Chain:C ((5-267))----KVLTIAGSDTSAGAGMQADLKTFQELDTYGMVALTAIVTMDKDTWSHDVTPLPMDVFEKQLET-ALSIGPDAIKTGMLGTEEIIKRAGEVYEASNAQYFVVDPVMVCKGEDEVLNPGNTEAMIKYLLPKATVVTPNLFEAGQLSGLGKLNSIEDMKKAATIIFDKGAQHVIIKGGKALDQDKSYDLYYDGQTFYQLTTDMFQQSYNHGAGCTFAAATTAYLANGKSPKEAVISAKAFVASAIKNGWKMNDFVGPVDHGAYNRIE---


General information:
TITO was launched using:
RESULT:

Template: 4C5J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -122595 for 2306 contacts (-53.2/contact) +
2D Compatibility (PS) -28943 + (NN) -9405 + (LL) 272
1D Compatibility (HY) -15600 + (ID) 5250
Total energy: -181521.0 ( -78.72 by residue)
QMean score : 0.483

(partial model without unconserved sides chains):
PDB file : Tito_4C5J.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4C5J-query.scw
PDB file : Tito_Scwrl_4C5J.pdb: