Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDSAHSQLEQQLQQIKKAKITAETDADQTRRKQNEQDWLEEDSNQLTQEKRVLLDFLRSGWQGEEASSFHRYLEEQQHEESQVWRRDLQDKRSDLDTELQENKDRLHTLEAKQATLQKEWSQ
1W53 Chain:A ((1-84))
-MDFREVIEQRYHQLLSRYIAELTETSLYQAQKFSRKTIEHQIP------------------PEEIISIHRKVLKELYP--------------SLPEDVFHSLDFLIEVMIGYGMAY-----
General information:
TITO was launched using:
RESULT:
Template:
1W53.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 52377 for 506 contacts (103.5/contact) +
2D Compatibility (PS) -9571 + (NN) -6030 + (LL) 3336
1D Compatibility (HY) -3200 + (ID) 700
Total energy: 36212.0 ( 71.57 by residue)
QMean score : 0.436
(partial model without unconserved sides chains):
PDB file :
Tito_1W53.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1W53-query.scw
PDB file :
Tito_Scwrl_1W53.pdb
: