Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -MKNLFLTSSFKDVVPLFTEFESNLQGKTVTFIPT----ASTVEEVTFYVEAGKKALESLGLLVEELDIATESLGEITTKLRKNDFIYVTGGNTFFLLQELKRTGADKLILEEIAAGKLYIGESAGAVITSP--------NIAYIQTMDSTKKAVNLTNYDALNLVDFSTLPHYNNTPFKEITQKIVTEYAGKSQIYPISNHEAI-FIRGKEVITKRLS------------------------------------------------------------------------------------------------ |
| 3V3T Chain:A ((1-306)) | MKNKIVFAPIGQGGGNIVDTLLGICGDYNALFINTSKKDLDSLKHAKHTYHIPKERKKAVGYAQTY---YKQIIAQIMEKFSSCDIVIFVAT-----MAGGAGSGITPPILG--LAKQMYPNKHFGFVGVLPKATEDIDEHMNAIACWNDIMRSTNEGKDISIYLLDNNKRE-----KESDINKEFATLFNDFMNMSESHAEGVVDEDEISKLLTMKKSNVILEFDDKEDIQVALAKSLKESIFAEYTTNTCEFMGISTTRVVDVEAIKSIVGYPRRTFKGYNSKKNIVVATGIEPQKTTVQMMNEIIEDKMKQR |
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General information:
TITO was launched using:
| RESULT:
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Template: 3V3T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -37199 for 1534 contacts (-24.2/contact) +
2D Compatibility (PS) -20053 + (NN) -2387 + (LL) 1052
1D Compatibility (HY) -4400 + (ID) 1200
Total energy: -64187.0 ( -41.84 by residue)
QMean score : 0.311
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