Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTKGIKIATIGGGSSYTPELIEGFIKRQDELPV-RELWLVDVEAGREKLEIVGNLAKRMVEKAG---VDMEVHLTLDREEALKDADFVTTQLRVGLLDARVKDERIPNSYGVVGQETNGPGGMFKGLRTIPVILDICKDMERLCPDAWLINFANPAGMVTEAVLRY--SNQKKVVGLCNGP--IGIERNIAETLGVDVSEIYVEFVGLNH---MVFAKTVYHNGKDVTKDVVFKMTEDEAGSSLKNINATGWDKTFLRTLNMIPIDYLRYYWQTKQQLEDQARAYAEHGTRAEVVKKVEAELFELYKQEELAEKPKQLEQRGGAYY--SEAACNLINSIYNDKRDIQIVNTRNNGAILDIDPDSAVETNCVITRQGPIPLASGRLPIAINGIIQEIKTFERLTAEAAVTGDYDKALLAMTINPLTPSESVAREMLDELLEAHKEYLPNFFK |
| 3TL2 Chain:A ((6-305)) | -IKRKKVSVIGAGFTGATTAF--LLAQ----KELADVVLVDIPQ--LE-NPTKGKALDMLEASPVQGFDANIIGTSDYA-DTADSDVVVITAGIARKPGMSRDD--------------------LVATNSKIMKSITRDIAKHSPNAIIVVLTNPVDAMTYSVFKEAGFPKERVIGQSGVLDTARFRTFIAQELNLSVKDITGFVLGGHGDDMVPLVRYSYAGGIPLETLIPK--------------------------------E---RL---EAIVER-T-------------RKGGGEIVGL-L------------GNGSAYYAPAASLVEMTEAILKDQRRVLPAIAYLEGEY-GY-SDLYLGVPVILGGNGIEKIIELELLADEKEALDRSVE----------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3TL2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -132400 for 2415 contacts (-54.8/contact) +
2D Compatibility (PS) -30888 + (NN) -5755 + (LL) 10372
1D Compatibility (HY) -8400 + (ID) 2550
Total energy: -169621.0 ( -70.24 by residue)
QMean score : 0.523
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