Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSDKLSQEQIDALLSQMSEGKVVDESTEIGDFGRFHPYDFHKPEKFGAEHLESLKTIASAFTKKSMEFVSQRIRIPIHTEATLADQVSFASGYIETMPNDSYIFCIIDLGNPELGQIIIELDLAYIIYIHECLSGGNPKRKLSERRLLSVFEELTLKSILEKFCEALKDSFKSVHPISPEIVNIETNPALLRVTSPNDMMALVSVDIKSEFWISTMRIGVPFFSVEEIMNKLENVVEYTFDKRRNFDAEVEQELHQVEKEARIRVGEIKTTWKELNKLEVGDVLLTETHIRDTLKGYVTEKWKFECYMGKSGNQKAVKFMRHTGRTEQER |
| 3HM4 Chain:A ((4-121)) | ---------------------------------------------------SSGIEIAKPFVTATTNVLSTMAGIQPIPGQPYVKKNNV--------AKGDVSA-VVGITGHKNGSISVTFTKQCAIAVVKAMLGDDI-------QDIIQDTKDAVGEVTNMISGQARAALSE-MGMTFQGATPSV------------------------------------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3HM4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -76452 for 803 contacts (-95.2/contact) +
2D Compatibility (PS) -12609 + (NN) -4997 + (LL) 15936
1D Compatibility (HY) -400 + (ID) 500
Total energy: -79022.0 ( -98.41 by residue)
QMean score : 0.364
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