Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VRKLGLMTILFWMFLSVQAFAADLEPPMI-SLEKEQRVFTSGEVISFHVKNPEELKIVLVNEHGQRKLLDGETYTVTDWDLDGNYQAEFYQADISKPVVTVEDLFEVKQLEEVAKDETAPSLKMIEITHDEDVLPTSVLYASAELDDAESGVKQAILLVHSKSNESEMELIRNNYTGEFDAEIPLEKFQLGEELTFQLQLVDFAENEITLDLENTIQLYEPKAPVLSYDGS--DITNVQKKIGQVGNRIELTLDKYTTEFPELETENGKTIPLLWQKTATEWKGSLALTTELSGEIIHIQEMNQYM-LVRATSEPFGDIQLINNSILTGTIHPDFTFISNLYVEVNGQNFPIKRTDNSFTSAEITTTGKITLHWTDWDGQVFSKQMNQEIKPVIEMPDKETIAPPSVIPKEKESLLTSPDPKPSVESHENTPKKQEKKETSTKNKSSSIPFWIPALMIIGVIIFSGNRAMK |
| 3ZSC Chain:A ((4-332)) | DKPVGFASVP----------TADLPEGTVGGLGGEIVFVRTAEELEKYTTAEGKYVIVVDG------------------------------------TIVFEPKREIKV----------LSDKTIVGIND-----AKIVGGGLVIKDAQN------VIIRN---------------------IHFEGFYMEDDPRGKKYDFDY------INVENSHHIWIDHITFVNGNDGAVDIKKYSNYITVSWNKFV-----------------DHDKVSLVGSSDKEDPEQAGQAYKVTYHHNYFKNLIQRMPRIR-----FGMAHVFNNFYSMGLRTGVSGNVFPIYGVASAMGAKVHVEGNYFMG----------------YGAVMAEAGIAFLPTRIMGPVEGYLTLGE--GDAKNEFYYCKEPEVRPVEEGKPALDPREYYDYTLDPVQDVPKIVVDG--------AGAGKLV |
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General information:
TITO was launched using:
| RESULT:
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Template: 3ZSC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 38797 for 2968 contacts (13.1/contact) +
2D Compatibility (PS) -32994 + (NN) 5541 + (LL) 10700
1D Compatibility (HY) -8400 + (ID) 2500
Total energy: 11144.0 ( 3.75 by residue)
QMean score : 0.227
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