Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKSFQALFIEKEADNTSLHFRETTIDNLPENEVTIEVHYSGINYKDGLAVLPDGKI----VSEYPFIPGIDASGVVVNSK--SDQFQVGDEVIVTSYDFGVSYFGGYSEFIRVPAEWVVPLPDGLSLKEAMILGTAGFTAALSVDALEFSGVTPNAGKIAVSGATGGVGSLSSAILSKRGFSVVASSGKSDAKEFLEKFGVSEIVSREAFQPEKVRALDKQLYAGAIDCVGGKPLSYLLTAVQYGGAVTTCGMSAGGKLDTTVFPFILRGIQLFGIDSVLCPMSKRERIWNRLA-TDYKLTNLESLATEIAFSELPESLHQVMNGGVTGRYLVKVK |
| 3TQH Chain:A ((5-321)) | -KEMKAIQFDQFGPPKVLKLVDTPTPEYRKNQMLIKVHAASLNPIDYKTRNGSGFVAKKLKNNLPSGLGYDFSGEVIELGSDVNNVNIGDKVMGIAG--FPDHPCCYAEYVCASPDTIIQKLEKLSFLQAASLPTAGLTALQALNQA---EVKQG-DVVLIHAGAGGVGHLAIQLAKQKGTTVITTASK-RNHAFLKALGAEQCINYHEED--FLL-AISTPVDAVIDLVGGDVGIQSIDCLKETGCIVSVPTITAGRV-IEVA--KQKHRRAFGLL-KQFNIEELHYLGKLVSEDKLRI--E--ISRIFQLSEAVTAHELLETGHVRGKLVFKVR |
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General information:
TITO was launched using:
| RESULT:
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Template: 3TQH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -209227 for 2829 contacts (-74.0/contact) +
2D Compatibility (PS) -32899 + (NN) -3843 + (LL) 632
1D Compatibility (HY) -9600 + (ID) 3000
Total energy: -257937.0 ( -91.18 by residue)
QMean score : 0.534
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