Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNQVAPFYADHVGSILRTKGIKDAR-EKFQSGEITALELRKIENTEIKYIVEKQKEVGLKSITDGEFRRAWWHFDFLENLDGVEGYDAAGGIQFSKVQTKSHSVKITGPIDFTTHPFIEDFIFLKEAVGDNHVAKQTIPSPAMLHYRGDIEYQPYLDDAEKFANDLATAYQKAIQAFYDAGCRYLQLDDTSWSYLCSDEQREVVRQRGFDPETLQETYKNLINEAIKHKPADMVITMHICRGNFRSTWIAEGGYGPVAETL--FGKLNIDGFFLEYDNERSGDFAPLKYVTRPDLKIVLGLITSKTGELEDEAAIKARIEEASEIVPLSQLRLSPQCGFASTEEGNILTEEEQWDKLRYVVRLANDIWGE |
4I1O Chain:B ((12-302)) | PLTLLMTSSTSFSETINQWADILKTMEKFDSNPINLLELVKQFNLYVDELAITCEANNV----------------WASTPNLFALYDNSGG-------------EAIHGHAFVPY-YKESIVLRRLFTVDPNT-------------FNLSRFAAFEGPCQLYCAAHADSAWVKIQTLLTLGNGIIN----TLKIIKQAQAFGIDEAVTENLKALKEQFIAFQLAEADIKESLKAPSFA--EPNKESEFF----YPIDEKALAKMNGYQLATICLEELNSPKPS------------PLIERILSN--------KKFWKRINSAFE------------SGVFKGRTDDPAGKIAKIREWHQLLQISG----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4I1O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -12158 for 2116 contacts (-5.7/contact) +
2D Compatibility (PS) -29609 + (NN) -9025 + (LL) 5448
1D Compatibility (HY) -7200 + (ID) 1800
Total energy: -54344.0 ( -25.68 by residue)
QMean score : 0.318
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