Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
PRCPNLDEPTVGIDPELRKTIWEELDDLKAN-GKCILVTTHVMDEAEK-CDRLAMIRNGEIIAVGTPQELSSKTSSGKLEDAFLEFGGKH
3TUZ Chain:C ((182-253))
PKVLLCDQATSALDPATTRSILELLKDINRRLGLTILLITHEMDVVKRICDCVAVISNGELIEQDTVSEVFS------------------
General information:
TITO was launched using:
RESULT:
Template:
3TUZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -11632 for 392 contacts (-29.7/contact) +
2D Compatibility (PS) -7923 + (NN) -4369 + (LL) 608
1D Compatibility (HY) -5200 + (ID) 1350
Total energy: -29866.0 ( -76.19 by residue)
QMean score : 0.402
(partial model without unconserved sides chains):
PDB file :
Tito_3TUZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3TUZ-query.scw
PDB file :
Tito_Scwrl_3TUZ.pdb
: