Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNQAIDAILGHYSVRKFEDKDLTEEALTLLIKSAQAASTSSFVQAYSIIGITDKDIREQISAIAGNQPYTVQTGQLFIFVADLARHHAILEEHQVDTAALETSEKWLVSVIDAALAAQNMAIAAESLGLGICFIGGIRNDVEQIAEILDLPPYTMPLFGLTIGHPVAN-KE-KAKPRLPQDLVYHENSYKKMNPETLAEYDKQIKTYYNERTAGKRVEGWSEQIARGLGRPSRLDLKAFLEKQHLNQK
3GE5 Chain:A ((28-198))
-RLIEDFFRTRRSVRKFIDRPVEEEKLMAILEAGRIAPSAHNYQPWHFLVVREEEGRKRLAPC-SQQPWFPGAPIYIITLGDHQRAW-KR--G-----------AGDSVDIDTSIAMTYMMLEAHSLGLGCTWVCAF--DQALCSEIFDIPSHMTPVSILALGYGDPTVPPREAFNRKTIEEVVSFEKL-----------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3GE5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -117749 for 1198 contacts (-98.3/contact) +
2D Compatibility (PS) -18481 + (NN) -11079 + (LL) 5612
1D Compatibility (HY) -6400 + (ID) 1950
Total energy: -150047.0 ( -125.25 by residue)
QMean score : 0.470
(partial model without unconserved sides chains):
PDB file :
Tito_3GE5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3GE5-query.scw
PDB file :
Tito_Scwrl_3GE5.pdb
: