Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LVKVVFVCLGNICRSPMAEGLFRKEVANAGLTDEIKIDSAATGTWNLGKPPHRGTQEVLKKHG--VDYQAMRARKISDADFKEADFIIGMDQQNLADLNALNNNPDVIIRSLMSF--VSGQEDKDIPDPYY--TGDFDETERMVTEGVKALLAYITKK
1U2Q Chain:A ((5-156))
-LHVTFVCTGNICRSPMAEKMFAQQLRHRGLGDAVRVTSAGTGNWHVGSCADERAAGVLRAHGYPTDHRAAQV----GTEHLAADLLVALDRNHARLLRQLGVEA-ARVRMLRSFDPRSGTHALDVEDPYYGDHSDFEEVFAVIESALPGLHDWVDER
General information:
TITO was launched using:
RESULT:
Template:
1U2Q.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -66380 for 1217 contacts (-54.5/contact) +
2D Compatibility (PS) -15737 + (NN) -5970 + (LL) 440
1D Compatibility (HY) -10000 + (ID) 2500
Total energy: -100147.0 ( -82.29 by residue)
QMean score : 0.630
(partial model without unconserved sides chains):
PDB file :
Tito_1U2Q.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1U2Q-query.scw
PDB file :
Tito_Scwrl_1U2Q.pdb
: