Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDILQTANERMEQLAALMNKDIEQKIPAGEKVKVGVDLGTSSIVFVVLDENNVPLFGAFEFADAVRDGLVVNYRESVEVVTRLKNRAEKCLGISLTHASGAIPPGTVGNNKKVVAN-VIESAGMEALYTIDEPTAAAAVLD--------LQNGAVVDVGGGTTGISVFENGEVIYT--ADEPTGGTHMTLVLAGYYGVPVEEAEQNKRAQKDS----------------------SEH----FSVMRPV------VEKMAEITRVHLEKS-------PSEPLYIVGGASAYSQFKDTFESYLKMP---------VFQPNYPQYVTPLGIAMSSGSENL |
3DWL Chain:A ((92-397)) | --------------------------------------------------------------YPIRHGQIENWDHMERFWQQSLFKYLR-CEPEDHYFLLTEPPLNPPENRENTAEIMFESFNCAGLYIAVQAVLALAASWTSSKVTDRSLTGTVVDSGDGVTHIIPVAEGYVIGSSIKTMPLAGRDVTYFVQSLLR--LKTAERIKEECCYVCPDIVKEFSRFDRLKYASIDVGFERFLAPEIFFNPEIASSDFLTPLPELVDNVVQSSPIDVRKGLYKNIVLSGGSTLFKNFGNRLQRDLKRIVDERGVDVNVISHKRQRNAVWFGGSLLAQTP-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3DWL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -42626 for 1555 contacts (-27.4/contact) +
2D Compatibility (PS) -22029 + (NN) -2384 + (LL) 5232
1D Compatibility (HY) -5600 + (ID) 2050
Total energy: -69457.0 ( -44.67 by residue)
QMean score : 0.287
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