Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LELPFSGQSIIPAAHNQKDMEKILELGLTYMVMLETHVAQLKSLVKYAQAGGKKVLLHADLVNGLKNDDYAIDFLCTEICPDGIISTRGNAIMKAKQHKMLAIQRLFMIDSSACNKGVALIQKVQPDCIELLPGIIPEQVQKMTQKLHIPVIAGGLIETSEQVNQVIASGAIAVTTSNKHLW
3KTS Chain:C ((4-184))
-ELPFSNQSIIPAAHNQKDMEKILELDLTYMVMLETHVAQLKALVKYAQAGGKKVLLHADLVNGLKNDDYAIDFLCTEICPDGIISTRGNAIMKAKQHKMLAIQRLFMIDSSAYNKGVALIQKVQPDCIELLPGIIPEQVQKMTQKLHIPVIAGGLIETSEQVNQVIASGAIAVTTSNKHLW
General information:
TITO was launched using:
RESULT:
Template:
3KTS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -148634 for 1492 contacts (-99.6/contact) +
2D Compatibility (PS) -19089 + (NN) -4912 + (LL) 176
1D Compatibility (HY) -27600 + (ID) 8850
Total energy: -208909.0 ( -140.02 by residue)
QMean score : 0.514
(partial model without unconserved sides chains):
PDB file :
Tito_3KTS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3KTS-query.scw
PDB file :
Tito_Scwrl_3KTS.pdb
: