Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGLTATEALMKMKEKGYKHTDKREFLINLLARKNKYLTAKDVLENMKDDFPGISFDTIYRNLSLFVELGIFEETDLSGE-RNFRLACTHEHHHHHFICMKCGKTKEIMMCPMDFLTE---ALPGYQIDGHKFEVYGECPECLQAS
3EYY Chain:A ((3-135))
----STDWKSDLRQRGYRLTPQRQLVLEAVDT-LEHATPDDILGEVRKTASGINISTVYRTLELLEELGLVSHAHLGHGAPTYHLADR--HHHIHLVCRDCTNVIEADLSVAADFTAKLREQFGFDTDMKHFAIFGRCES-----
General information:
TITO was launched using:
RESULT:
Template:
3EYY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -56041 for 847 contacts (-66.2/contact) +
2D Compatibility (PS) -14084 + (NN) -4741 + (LL) 944
1D Compatibility (HY) -6800 + (ID) 1700
Total energy: -82422.0 ( -97.31 by residue)
QMean score : 0.485
(partial model without unconserved sides chains):
PDB file :
Tito_3EYY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3EYY-query.scw
PDB file :
Tito_Scwrl_3EYY.pdb
: