Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceVKLAKKWRDWYIESGKKYLFPLLLVCFAVIAYFLVCQMTKPESYNVKLFQVAEKTIRSPQTVEDTEKTKEERTKASDAVEDVYVYNRETGQNRVALIQSLFAYVNEVNAEAQEKDTKNKEKAKKENKPAPAPTSTEDKLKNLKDKLSSNVSEKITSNISDEVFTTLIEAKSKDFNVMEDVVTTEVEKSMENKIRDENLNSVKIRARDDIELSAIPAYYKNVSKALVSYAIVPNEVYDEEQTDARRKEAAQSVVPVKILQGQVIVQEGQIVDRETYRQLKMLHLLDQKMPVKQYAGFAIFIIALAAILFLYTKKQTQPKAKKMQTMLIFSSVYLVSLFMLFIILFLETQNIANIAFLFPAAFAPMILKILLNEKYAFLSVIFIAVTSLLTFQNDATSGITIFILLSG-----ATSVVMLRDYSRRSAIMLSGFMVGLINMIYVLLLLLINNSTLL-QVSTLMALGYAFLGGFGAFILGVGVIPLFETIFGLLTTSRLVELANPN-HPLLKKILMKAPGTYHHSMMVANLAEACADKIG----ANSLLVRVGCFYHDIGKTLRPPYFVENQLQGINPHDRLTPEQSRDIILSHTKDGAEILKE-NHMPQPIIDIALQHHGTTLLKYFYFKAKETNPDVKEADYRYSGPKPQTKEIAIINISDSVEAAVRSSTEPTMAKITEIIDGIIKDRFLDGQFTECDITIQEIKIIRDTLIATLNGIYHQRIQYPDDKD
3TM8 Chain:A ((20-328))----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------HMDYVSIRVSTLRGDQKIDFNAYVKINDKMILYLRRGDSFEGERLKRLKDKKLRKMYILTDEENSYRTYLQKNIETAYDDTTGKDIQTRADIIQGSQQNNAEEVFENPENVESYNYCKDAAGKYVNFIMSNAQALSAVMNIENTDKTISHHGVTVSTLSIALAQKLGITDPKKTQLLTLGALLHDYGHHHSPL-------NLNQPLDSMS-PEDLALWKKHPIEGAQKVQDKKHFDQTVINIIGQHE-------------ETINGTGPKGLREKDMDPLAVLVSSANAMDRLITFEGVPKAEAAKKLMIDHVGKHPLQHIQHLNDILKGL------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3TM8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		3D Compatibility (PKB) -180698 for 2448 contacts (-73.8/contact) +
2D Compatibility (PS) -30880 + (NN) -4661 + (LL) 36776
1D Compatibility (HY) 2400 + (ID) 2200
Total energy: -179263.0 ( -73.23 by residue)
QMean score : 0.201

(partial model without unconserved sides chains):
PDB file : Tito_3TM8.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3TM8-query.scw
PDB file : Tito_Scwrl_3TM8.pdb: