Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFVDQVKIYVKAGNGGDGMVAFRREKFVPNGGPAGGDGGKGADVVFVVDEGLRTLVDFRFKRIFKAEHGEHGMSKSMHGRGAEDLVVKVPQGTIVKDIDTGEIIADLVAHGQRAVIAKAGRGGRGNKRFATPANPAPELSENGEPGQERNVQLELKVLADVGLVGFPSVGKSTLLSVVSAARPKIAAYHFTTIVPNLGMVDAGDGRSFVMADLPGLIEGASQ--GVGLGHQFLRHIERTRVIVHVIDMSGSEGRVPYEDYMAINNELEQYNLRLMERPQIIVANKMDMPDAEENL---NEFKTKIAEDIPVFPISAVTKTGLRELLLAIADKLETTPEFPLNEILEQEDEDTVLYKYVAEEPDFEISREPDGTFVLSGAKIERLFTMTNFERDASISRFARQLRAMGVDEALRKRGAKDGDIVRLLDYEFEFMD |
| 3B1V Chain:A ((3-164)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------MTEIALIGNPNSGKTSLFNLITGHNQRVGNWPGVTVERKSGLVK--KNKDLEIQDLPGIYSMSPYSPEAKVARDYL-LSQRADSILNVVDATN---LER---NLYLTTQLIE-----TGIPVTIALNMIDVLDGQGKKINVDKLSYH--LGVPVVATSALKQTGVDQVVKKAAHTTTS--------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3B1V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -96374 for 1307 contacts (-73.7/contact) +
2D Compatibility (PS) -16251 + (NN) -1331 + (LL) 15600
1D Compatibility (HY) -7600 + (ID) 1550
Total energy: -107506.0 ( -82.25 by residue)
QMean score : 0.505
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