Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPQFFLNKRLIILLISIIVLVALVGFSLRDRENASWPEQFVKDVVGFGENIVAKPTSFISGAVDGVVDLKNTYTENQHLKERLEELAQLESEVADLKKENKDLKESLDITDSIRDYDPLNASVISRNPTNWNDQVEIDKGSSDGVKPDMAVTTPSGLIGKVTTTGAKSATVELLTSSDVKNRVSAKVQGKENAFGIINGYDSDTKLLELKQLPYDMKFKKGQKVVTSGLGGKFPAGIFIGTIEKVETDKMGLSQTAFIKPGADMYDLNHVTVLKRSAEAGTTDDDTTSSDTTGGQ |
| 1KD8 Chain:A ((1-35)) | ----------------------------------------------------------------------EVKQLEAEVEEIESEVWHLENEVARLEKENAECEA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1KD8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 7941 for 133 contacts (59.7/contact) +
2D Compatibility (PS) -4005 + (NN) -3815 + (LL) 13832
1D Compatibility (HY) -1600 + (ID) 550
Total energy: 11803.0 ( 88.74 by residue)
QMean score : 0.729
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