Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKVLVNNHLVEREDATVDIEDRGYQFGDGVYEVVRLYNGKFFTYNEHIDRLYASAAKIDLVIPYSKEELRELLEKLVAENNINTGNVYLQVTRGVQNPRNHVIPDDFPLEGVLTAAAREVPRNERQFVEGGTAITEEDVRWLRCDIKSL-NLLGNILAKNKAHQQNALEAILH-RGEQVTECSASNVSIIKDGVLWTHAADNLILNGITRQVIIDVAKKNGIPVKEADFTLTDLREADEVFISSTTIEITPITHIDGVQVADGKRGPITAQLHQYFVEEITRACGELVFAK |
5DAA Chain:A ((1-277)) | GYTLWNDQIVKDEEVKIDKEDRGYQFGDGVYEVVKVYNGEMFTVNEHIDRLYASAEKIRITIPYTKDKFHQLLHELVEKNELNTGHIYFQVTRGTSPRAHQ--FPENTVKPVIIGYTKENPRPLENLEKGVKATFVEDIRWLRCDIKSLN-LLGAVLAKQEAHEKGCYEAILHR-NNTVTKGSSSNVFGIKDGILYTHPANNMILKGITRDVVIACANEINMPVKEIPFTTHEALKMDELFVTSTTSEITPVIEIDGKLIRDGKVGEWTRKLQKQFETKIP---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 5DAA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -131719 for 2180 contacts (-60.4/contact) +
2D Compatibility (PS) -29692 + (NN) -8726 + (LL) 1356
1D Compatibility (HY) -24400 + (ID) 6900
Total energy: -200081.0 ( -91.78 by residue)
QMean score : 0.540
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